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FastDigest® AvrII (XmaJI)*

* FastDigest® AvrII (XmaJI) is a proprietary formulation of XmaJI,
an isoschizomer of AvrII having the same recognition and
cleavage specificity.
5'-C^C T A G G-3'
3'-G G A T C^C-5'

1.0% agarose
Digested lambda DNA in 5 min with FastDigest® AvrII (XmaJI)

fast digest, fast digestion, time saver
     
#FD1564
Supplied with:
10X FastDigest® buffer
20 reactions
 
1 ml

Related Documents (in pdf, ~55 KB):

Certificate of Analysis: #FD1564
MSDS (English)
MSDS (English-USA)
MSDS (German)
Chart (in pdf, 834 KB)
Brochure (in pdf, 383 KB)
LabAid™ (in pdf, 97 KB)

 

Features

Unit Definition
One FastDigest® Unit (FDU) is the amount of the enzyme required to cleave 1 µg of lambda DNA-SmaI fragments in 5 min at 37°C in 1X FastDigest® buffer.

Concentration
1 FDU/µl.

Recommended
buffer

Reaction conditions

Temperature Time
FastDigest® buffer 37°C 5 min

Thermal Inactivation
Phenol/chloroform extraction and ethanol precipitation of DNA. Thermal inactivation is not applicable for FastDigest® AvrII (XmaJI).

Digestion of Plasmid DNA
1 µl of FastDigest® AvrII (XmaJI) digests up to 1 µg of plasmid DNA in 5 min, see Protocol for Fast Digestion and Analysis of Plasmid DNA with FastDigest® Enzymes and Protocol for Fast Vector Preparation with FastDigest® Enzymes.

Digestion of PCR Products
1 µl of FastDigest® AvrII (XmaJI) digests ~0.2 µg of PCR product in 5 min, see Protocol for Fast Digestion of PCR Products with FastDigest® Enzymes.

Digestion of Genomic DNA
1 µl of FastDigest® AvrII (XmaJI) digests 1 µg of genomic DNA in 10 min, or 5 µg of genomic DNA in 30 min, see Protocol for Fast Digestion of Genomic DNA with FastDigest® Enzymes.

Ligation and Recleavage
After overdigestion with 1 µl of FastDigest® AvrII (XmaJI) for 1 hour, more than 95% of the DNA fragments can be ligated and recut.

Methylation Effects
Dam:
Dcm:
CpG:
EcoKI:
EcoBI:
 never overlaps
 never overlaps
 never overlaps
 never overlaps
 never overlaps
  - no effect.
- no effect.
- no effect.
- no effect.
- no effect..

Compatible Ends
BcuI, Eco130I, NheI, SpeI, StyI, XbaI.

Recommendations for Double and Triple Digestions with FastDigest® Enzymes

Perform 5 minute double or triple digestions with FastDigest® AvrII (XmaJI) and any other FastDigest® enzyme(s) in FastDigest® buffer, see Protocol for Double Digestion with FastDigest® Enzymes and Protocol for Triple Digestion with FastDigest® Enzymes.

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Updated vasario 05, 2008 15:47